Information for 4-CRCGTGACGT (Motif 3)

A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T
Reverse Opposite:
T C G A A T G C C T A G A C G T T A G C C T G A A G T C T A C G A G T C T A C G
p-value:1e-18
log p-value:-4.252e+01
Information Content per bp:1.662
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif10.81%
Number of Background Sequences with motif1829.2
Percentage of Background Sequences with motif4.05%
Average Position of motif in Targets49.2 +/- 24.9bp
Average Position of motif in Background47.0 +/- 37.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1/MA0604.1/Jaspar

Match Rank:1
Score:0.78
Offset:3
Orientation:forward strand
Alignment:CRCGTGACGT-
---ATGACGTA
 A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.77
Offset:4
Orientation:forward strand
Alignment:CRCGTGACGT
----TGACGT
 A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CRCGTGACGT
-NCGTGACN-
 A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CRCGTGACGT
NCACGTGACN-
 A C G T A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CRCGTGACGT
NCACGTGACN-
 A C G T A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:6
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CRCGTGACGT---
-CGGTGACGTCAC
 A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T A C G T A C G T A C G T
A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CRCGTGACGT--
CCGGTCACGTGA
 A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T A C G T A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CRCGTGACGT
GCCACGTGACC-
 A C G T A C G T A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CRCGTGACGT
RTCATGTGAC--
 A C G T A C G T A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:10
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CRCGTGACGT--
----TGACGTCA
 A T G C T C A G A T G C A C T G A G C T A T C G G T C A A G T C A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A