Information for 15-ACYTTSSCRACGC (Motif 12)

C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T A G C T A C T G A T G C A T G C C G T A G C T A C T A G A C T G A C G T
p-value:1e-8
log p-value:-1.855e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets77.7 +/- 19.2bp
Average Position of motif in Background27.9 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACYTTSSCRACGC-
TACCATAGCAACGGT
 A C G T C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx1/MA0509.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACYTTSSCRACGC
GTTGCCATGGCAAC--
 A C G T A C G T A C G T C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ACYTTSSCRACGC-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

RFX4/MA0799.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACYTTSSCRACGC
CGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACYTTSSCRACGC
--CTTGGCAA---
 C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACYTTSSCRACGC-
CCGCATAGCAACGGA
 A C G T C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACYTTSSCRACGC
TTGCCATGGCAACN-
 A C G T A C G T C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T

RFX3/MA0798.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACYTTSSCRACGC
CGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACYTTSSCRACGC-
NNTTTANNCGACGNA
 A C G T C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

RFX5/MA0510.2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACYTTSSCRACGC
NGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C C A G T A C G T A T C G A T C G A G T C C T G A C G T A A G T C A C T G A G T C
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G A C G T