Information for 12-TTTTCAAATC (Motif 10)

A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C
Reverse Opposite:
C T A G G C T A A C G T A C G T A C G T C T A G C G T A C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.878
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.7 +/- 26.2bp
Average Position of motif in Background52.3 +/- 42.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TTTTCAAATC
CGGTTTCAAA--
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTTCAAATC
NATTCAAAT-
 A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTTCAAATC-
NNTTTTTCTTATNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTTCAAATC
ATTTTCCATT-
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTTCAAATC
ATATGCAAAT-
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTTCAAATC
TTTTCCA---
 A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTTCAAATC
TATGCAAAT-
 A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TTTTCAAATC----
----CAAATCACTG
 A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCAAATC
TTATGCAAAT-
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTTTCAAATC---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C G T A C G T A C G A T A G T C A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A