Information for 5-CCAGTGGTAA (Motif 4)

A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T C T A G C T A G
p-value:1e-15
log p-value:-3.656e+01
Information Content per bp:1.927
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.9 +/- 21.0bp
Average Position of motif in Background57.6 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCAGTGGTAA--
--AATGGAAAAT
 A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCAGTGGTAA--
--NATGGAAAAN
 A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTGGTAA
NTCAAGTGGN--
 A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCAGTGGTAA---
--AGTCGTAAAAA
 A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCAGTGGTAA---
--GGTCGTAAAAA
 A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCAGTGGTAA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCAGTGGTAA
GCTGTGGTTT
 A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAGTGGTAA------
CAAGGTCGTAAAATCTT
 A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAGTGGTAA
TTRAGTGSYK-
 A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAGTGGTAA------
TAAGGTCGTAAAATCCT
 A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T