Information for 7-CCTGTATTTT (Motif 12)

G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T
Reverse Opposite:
G C T A T G C A C T G A G C T A A G C T T G C A G A T C C G T A A C T G C T A G
p-value:1e-9
log p-value:-2.112e+01
Information Content per bp:1.815
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif260.0
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets48.8 +/- 23.6bp
Average Position of motif in Background51.4 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTGTATTTT----
--KCTATTTTTRGH
 G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTGTATTTT
GCTGTG----
 G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTGTATTTT------
-TTCTATTTTTAGNNN
 G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCTGTATTTT---
---CTATTTTTGG
 G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGTATTTT
GCTGTGGTTT
 G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTGTATTTT----
--GCTATTTTTAGC
 G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CCTGTATTTT
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGTATTTT
CCTTTGTTTT
 G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTGTATTTT-
-CTGTGGTTTN
 G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCTGTATTTT
---GTTTGTT
 G A T C A G T C C G A T C T A G A C G T C T G A C G A T A G C T A C G T C A G T
A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T