Information for 11-GTGCCCCTAGAGG (Motif 9)

A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T G C A C G T C T G A A C T G A C T G A C T G A T C G A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.8 +/- 20.5bp
Average Position of motif in Background47.7 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTGCCCCTAGAGG-
--GTCCCCAGGGGA
 A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGCCCCTAGAGG-
GGGGCCCAAGGGGG
 A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTGCCCCTAGAGG
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGCCCCTAGAGG-
-TGCCCTNAGGGCA
 A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGCCCCTAGAGG-
-TGCCCTGAGGGCA
 A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGCCCCTAGAGG--
--TGCCCTGAGGGCA
 A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTGCCCCTAGAGG---
-TGWCCTCARNTGACC
 A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTGCCCCTAGAGG---------
--GCCASCAGGGGGCGCYVNNG
 A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGCCCCTAGAGG
CTGCCCGCA----
 A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGCCCCTAGAGG
ATGCCCACC----
 A C T G A C G T A C T G A T G C A G T C A G T C A G T C A G C T C G T A A T C G C G T A A C T G A C T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T