Information for 10-CAGGCTGGTCCCT (Motif 6)

A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C T A G C T G A G T A C G T A C C G T A A C T G A G T C A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.254e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 33.8bp
Average Position of motif in Background55.7 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGGCTGGTCCCT
CAGTGTGGTCGC-
 A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTGGTCCCT
CGTGGGTGGTCC--
 A C G T A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGGCTGGTCCCT
AAGGCAAGTGT--
 A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGGCTGGTCCCT
--TKCTGTTCCA-
 A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGGCTGGTCCCT
-CAGCTGTTTCCT
 A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGGCTGGTCCCT
CTGTCTGTCACCT
 A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGGCTGGTCCCT
TWGTCTGV-----
 A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGGCTGGTCCCT
CATGCGGGTAC--
 A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CAGGCTGGTCCCT
AGNACAGNCTGTTCTN-
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGGCTGGTCCCT
--NGCTN------
 A G T C C G T A A C T G A C T G A G T C C G A T A C T G A C T G A G C T A G T C A G T C A G T C A C G T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T