Information for 12-AAAAAAAATTTTT (Motif 20)

G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T
Reverse Opposite:
C G T A G T C A C T G A C G T A C G T A C G A T A C G T A C G T G A C T A C G T C G A T A C G T C A G T
p-value:1e-6
log p-value:-1.406e+01
Information Content per bp:1.684
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif401.9
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets46.3 +/- 22.6bp
Average Position of motif in Background47.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAATTTTT
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAATTTTT
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A C G T G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAATTTTT
TACTGGAAAAAAAA----
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAATTTTT-
TTAAGAACAATAAATT
 A C G T A C G T G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAATTTTT
AGCCGAAAAAAAAAT---
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAAAATTTTT
NNCNNAACAATTNT-
 A C G T A C G T G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAAAATTTTT--
TNCNNAACAATTTTTNC
 A C G T A C G T G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAAAATTTTT--
TNNAGAACAATANATNN
 A C G T A C G T G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAAAAAAATTTTT
--NAACAAT----
 G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAATTTTT
-AAACAAACATTC
 G T C A G T C A C G T A G T C A C T G A T G C A G T C A G C T A G C A T C G A T G A C T A C G T C G A T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C