Information for 3-WSARTGGTGYCCC (Motif 2)

C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C T A G A G T C G T C A A G T C A G T C C G T A A G C T A G C T A T G C C G T A
p-value:1e-16
log p-value:-3.707e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 25.4bp
Average Position of motif in Background48.3 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WSARTGGTGYCCC-----
-NNNNGGTACCCCCCANN
 C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:WSARTGGTGYCCC-----
--GGGTGTGCCCAAAAGG
 C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:WSARTGGTGYCCC------
---NNNNTGACCCGGCGCG
 C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:WSARTGGTGYCCC--
------ATGCCCACC
 C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WSARTGGTGYCCC
TTRAGTGSYK----
 A C G T C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--WSARTGGTGYCCC
GGAGAAAGGTGCGA-
 A C G T A C G T C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:WSARTGGTGYCCC---
NNNGGGGCGCCCCCNN
 C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:WSARTGGTGYCCC---
GCGGAGGTGTCGCCTC
 C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:WSARTGGTGYCCC
-------TGACCT
 C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:WSARTGGTGYCCC----
TNNNNGGTGTCATNTNT
 C G A T A T C G C T G A C T G A A C G T A C T G A C T G A C G T A C T G G A T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T