Information for 4-TTACAAAWTG (Motif 10)

C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G
Reverse Opposite:
A T G C G T C A C G A T A C G T A C G T C G A T C T A G A C G T C G T A C G T A
p-value:1e-11
log p-value:-2.597e+01
Information Content per bp:1.745
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.95%
Number of Background Sequences with motif444.3
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets52.0 +/- 26.7bp
Average Position of motif in Background51.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTACAAAWTG
ANGTTACATAA--
 A C G T A C G T A C G T C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TTACAAAWTG
CCGTATTATAAACAA
 A C G T A C G T A C G T A C G T A C G T C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTACAAAWTG
GTCATAAAAN-
 A C G T C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTACAAAWTG
GTAAACAAT---
 A C G T A C G T C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTACAAAWTG
NCYAATAAAA--
 A C G T A C G T C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTACAAAWTG
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T A C G T C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTACAAAWTG-----
GTATAAAAGGCGGGG
 C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTACAAAWTG-----
GTATAAAAGGCGGGG
 C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTACAAAWTG
-AACAAT---
 C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTACAAAWTG-
ACCGTGACTAATTNN
 A C G T A C G T A C G T A C G T C G A T G C A T C G T A G A T C C G T A C G T A C G T A G C T A C A G T T A C G A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A