Information for 7-CCCCTAGCTG (Motif 8)

A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G A G T C C G A T C G T A A C T G A T C G A C T G A T C G
p-value:1e-12
log p-value:-2.795e+01
Information Content per bp:1.805
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif73.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets46.6 +/- 20.3bp
Average Position of motif in Background50.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCCCTAGCTG--
CCCCCTGCTGTG
 A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCCTAGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCCCTAGCTG
-----NGCTN
 A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCCCTAGCTG---
---CCAGCTGTTN
 A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCCTAGCTG--
GACCCCCCGCTGTG
 A C G T A C G T A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCCTAGCTG---
---CCTGCTGAGH
 A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCCCTAGCTG--
------GCTGTG
 A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCCTAGCTG---
GACCCCCCGCTGCGC
 A C G T A C G T A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTAGCTG
TTCCCCCTAC---
 A C G T A C G T A C G T A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTAGCTG
CGCCCCCTGACA-
 A C G T A C G T A C G T A T G C G T A C A T G C A G T C A C G T C G T A C T A G A G T C A C G T A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T