Information for 5-TKCAATGACASAGTGT (Motif 7)

C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T
Reverse Opposite:
C T G A G T A C C T G A A T G C C G A T A T C G C G A T T A C G A C G T A G T C G T C A G A C T A C G T A T C G G T C A G T C A
p-value:1e-13
log p-value:-3.083e+01
Information Content per bp:1.701
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.6 +/- 28.9bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TKCAATGACASAGTGT
----TTGACAG-----
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TKCAATGACASAGTGT
----TTGACAGG----
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TKCAATGACASAGTGT
NTGATTGACAGN----
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TKCAATGACASAGTGT
---RHTGWCAR-----
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TKCAATGACASAGTGT
BTGABTGACAGS----
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TKCAATGACASAGTGT---
----TWGHWACAWTGTWDC
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TKCAATGACASAGTGT---
----YDGHTACAWTGTADC
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TKCAATGACASAGTGT
--ARNTGACA------
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TKCAATGACASAGTGT
AACAATGNTATTGTT-
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TKCAATGACASAGTGT
--NCGTGACN------
 C A G T A C G T T A G C G T C A C T G A A C G T A C T G T G C A A G T C G C T A T A G C C G T A A T C G A G C T A C T G A G C T
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T