Information for 6-AACCTGCAGG (Motif 6)

T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T A T C G A T G C C G T A A T C G A C T G G A C T A C G T
p-value:1e-13
log p-value:-3.190e+01
Information Content per bp:1.851
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif388.2
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets42.4 +/- 22.1bp
Average Position of motif in Background50.4 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AACCTGCAGG
SNGCACCTGCHS-
 A C G T A C G T A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AACCTGCAGG
NCACCTGTN--
 A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AACCTGCAGG
NNCACCTGNN--
 A C G T A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AACCTGCAGG
AACACCTGCT--
 A C G T A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACCTGCAGG
CGCACCTGCT--
 A C G T A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AACCTGCAGG
RYHYACCTGB---
 A C G T A C G T A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACCTGCAGG
TACACCTGTC--
 A C G T A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AACCTGCAGG--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACCTGCAGG-
CCCCCTGCTGTG
 A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACCTGCAGG
CCTCACCTG----
 A C G T A C G T A C G T T G C A C T G A G T A C T A G C C G A T A T C G A T G C C G T A A C T G A C T G
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T