Information for 11-TCSGGASCTC (Motif 14)

A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G T A C G A C G T A G T C A G T C A T G C A C T G C G T A
p-value:1e-6
log p-value:-1.570e+01
Information Content per bp:1.854
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif32.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets53.1 +/- 28.8bp
Average Position of motif in Background51.2 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCSGGASCTC
--CGGAGC--
 A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCSGGASCTC
GGGCGGGACC--
 A C G T A C G T A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCSGGASCTC
GGTTAGAGACCT-
 A C G T A C G T A C G T A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCSGGASCTC-
GTACATCCGGATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCSGGASCTC-
---TGACCYCT
 A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCSGGASCTC
ANCAGGATGT-
 A C G T A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCSGGASCTC--
--GGGAGGACNG
 A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCSGGASCTC
NRYTTCCGGY----
 A C G T A C G T A C G T A C G T A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCSGGASCTC-
---TGACCTYA
 A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCSGGASCTC
---TGACCT-
 A C G T G T A C A T C G A C T G C T A G G T C A A T G C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T