Information for 9-TGTTTAGGAC (Motif 11)

C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C
Reverse Opposite:
C T A G C G A T A G T C A G T C C G A T C G T A G T C A C G T A A G T C C G T A
p-value:1e-8
log p-value:-2.072e+01
Information Content per bp:1.845
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif58.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets38.0 +/- 24.5bp
Average Position of motif in Background51.0 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0065.1_Hoxc10/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTAGGAC----
ANNTTTTACGACNTNN
 A C G T A C G T C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0067.1_Hoxc12/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTAGGAC----
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0076.1_Hoxd11/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTAGGAC----
ANNATTTTACGACNTNA
 A C G T A C G T A C G T C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0066.1_Hoxc11/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTAGGAC----
NNNTTTTACGACNTTN
 A C G T A C G T C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C A C G T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

FOXG1/MA0613.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTAGGAC
TTGTTTAC---
 A C G T C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTAGGAC----
NNNATTTTACGACNNTN
 A C G T A C G T A C G T C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTTTAGGAC
TGTTTAC---
 C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTTTAGGAC
NTTTTACGAC
 C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTTTAGGAC-
NTTTTACGACT
 C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

FOXD1/MA0031.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTAGGAC
ATGTTTAC---
 A C G T C G A T C T A G C G A T A C G T A C G T C G T A A C T G C T A G C G T A G A T C
G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T