p-value: | 1e-12 |
log p-value: | -2.880e+01 |
Information Content per bp: | 1.853 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 2.38% |
Number of Background Sequences with motif | 126.6 |
Percentage of Background Sequences with motif | 0.26% |
Average Position of motif in Targets | 40.1 +/- 26.2bp |
Average Position of motif in Background | 51.2 +/- 32.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCTGTTGCCA--- -CTGTTGCTAGGS |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TCTGTTGCCA-- ----TTGCCAAG |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCTGTTGCCA-- ---CGTGCCAAG |
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NFIA/MA0670.1/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCTGTTGCCA--- ---GGTGCCAAGT |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TCTGTTGCCA- -----TGCCAA |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCTGTTGCCA------- ---GTTGCCATGGNAAC |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCTGTTGCCA----- NNCGTTGCTATGGNN |
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Hic1/MA0739.1/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TCTGTTGCCA--- ----ATGCCAACC |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCTGTTGCCA----- NCCGTTGCTANGNGN |
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CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCTGTTGCCA NATGTTGCAA |
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