Information for 13-GAAAGGAGTAAGA (Motif 14)

A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A C G T C G T A A G T C A C G T A G T C A G T C A C G T A C G T A G C T A G T C
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.5 +/- 27.7bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGAGTAAGA
GGAGAAAGGTGCGA--
 A C G T A C G T A C G T A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAAGGAGTAAGA-
AAAAAGAGGAAGTA
 A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGGAGTAAGA--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGAGTAAGA---
TGAAGGGATTAATCATC
 A C G T A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAAAGGAGTAAGA
--VRGGATTARN-
 A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

PH0129.1_Otx1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGAGTAAGA---
AGAGGGGATTAATTTAT
 A C G T A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

SPI1/MA0080.4/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAAAGGAGTAAGA-
AAAAAGCGGAAGTA
 A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGAGTAAGA--
TTAGAGGGATTAACAAT
 A C G T A C G T A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGAGTAAGA
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGAGTAAGA--
TGAACCGGATTAATGAA
 A C G T A C G T A C T G C T G A C G T A C G T A A C T G A C T G C G T A A C T G C G A T C G T A C T G A A C T G C G T A A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A