Information for 3-CCCCTGTGTMGGGAGS (Motif 3)

A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
Reverse Opposite:
T A C G A G T C A C G T T A G C A G T C A G T C A C G T T G C A G T A C C G T A A T G C C G T A A C T G A C T G A C T G A C T G
p-value:1e-16
log p-value:-3.756e+01
Information Content per bp:1.791
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 22.8bp
Average Position of motif in Background70.0 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGTGTMGGGAGS
CACCCCCGGGGGGG----
 A C G T A C G T A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGTGTMGGGAGS
TCCCCTGGGGAC-----
 A C G T A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGTGTMGGGAGS
CCCCCCCGGGGGGGT---
 A C G T A C G T A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGTGTMGGGAGS
CCCCCCCGGGGGGGT---
 A C G T A C G T A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCTGTGTMGGGAGS
NTCNTCCCCTATNNGNN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCCCTGTGTMGGGAGS
-CCATGTGCTT-----
 A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCCCTGTGTMGGGAGS
--GCTGTG--------
 A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------CCCCTGTGTMGGGAGS
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGTGTMGGGAGS
TCCCCA-----------
 A C G T A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CCCCTGTGTMGGGAGS
-----GTGGGGGGGG-
 A G T C A G T C A G T C G T A C C G A T A T C G A C G T A C T G A C G T T G C A A C T G A C T G A C T G T C G A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T