Information for 11-AAGGCWKGCTCAT (Motif 9)

G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T
Reverse Opposite:
T G C A C G A T A C T G C G T A C T A G A T G C G T A C C G T A A C T G A T G C A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.192e+01
Information Content per bp:1.759
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif65.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets41.5 +/- 29.2bp
Average Position of motif in Background51.1 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGGCWKGCTCAT
AAGGCAAGTGT--
 G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGGCWKGCTCAT
--GGCGCGCT---
 G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAGGCWKGCTCAT--
---GCTGASTCAGCA
 G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AAGGCWKGCTCAT
CAAAGGCGTGGCCAG
 A C G T A C G T G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AAGGCWKGCTCAT
--TGCTGAGTCA-
 G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T
A C G T A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AAGGCWKGCTCAT
------NGCTN--
 G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCWKGCTCAT
TAAGGCGTCTTG--
 A C G T G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCWKGCTCAT
BCAGACWA------
 A C G T G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AAGGCWKGCTCAT----
--TGCTGAGTCATNNTG
 G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AAGGCWKGCTCAT
-----NGGATTAN
 G T C A C G T A C T A G T A C G A G T C C G A T A C T G A T C G A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T