Information for 4-YRGCCGSKAG (Motif 4)

A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G
Reverse Opposite:
T A G C G C A T T G A C T A C G A T G C C A T G C A T G G T A C A G T C T C G A
p-value:1e-15
log p-value:-3.581e+01
Information Content per bp:1.505
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif8.22%
Number of Background Sequences with motif1251.0
Percentage of Background Sequences with motif2.63%
Average Position of motif in Targets48.9 +/- 24.7bp
Average Position of motif in Background50.5 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YRGCCGSKAG-
-NACCGGAAGT
 A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G A C G T
A C G T T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YRGCCGSKAG-
-ANCCGGAAGT
 A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G A C G T
A C G T C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T

ETS(ETS)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YRGCCGSKAG-
-AACCGGAAGT
 A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G A C G T
A C G T T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YRGCCGSKAG-
-AACCGGAAGT
 A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G A C G T
A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T

ELK4/MA0076.2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:YRGCCGSKAG---
--NCCGGAAGTGG
 A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G A C G T A C G T A C G T
A C G T A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YRGCCGSKAG----
NNNACCGAGAGTNNN
 A C G T A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:YRGCCGSKAG
----TGCGTG
 A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:YRGCCGSKAG----
---CCGGAAGTGGC
 A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

ELK1/MA0028.2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:YRGCCGSKAG--
--ACCGGAAGTG
 A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G A C G T A C G T
A C G T A C G T C T G A T A G C T G A C A C T G A C T G T G C A G C T A T C A G A G C T C T A G

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:YRGCCGSKAG--
--RCCGGAAGTD
 A G C T T C A G C A T G G T A C G T A C T A C G A T G C A C T G C G T A A T C G A C G T A C G T
A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G