Information for 12-CGATTGGCTA (Motif 21)

G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A
Reverse Opposite:
A C G T C T G A C T A G A G T C G A T C C G T A T G C A A G C T T A G C C T A G
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.681
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.79%
Number of Background Sequences with motif911.5
Percentage of Background Sequences with motif2.04%
Average Position of motif in Targets53.4 +/- 26.4bp
Average Position of motif in Background48.4 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CGATTGGCTA--
TGATTGGCTANN
 G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTA
CCGATTGGCT-
 A C G T G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTA----
CTGATTGGTCNATTT
 A C G T G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTA
---TTGGCA-
 G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGATTGGCTA-
--NTTGGCANN
 G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------CGATTGGCTA-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGATTGGCTA-
-NNTTGGCANN
 G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CGATTGGCTA
-----NGCTN
 G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CGATTGGCTA-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTA-
---TWGTCTGV
 G A T C A T C G T C G A A C G T C G A T C T A G A C T G A G T C A G C T T G C A A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G