Information for 11-TGTCATTATC (Motif 20)

A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
Reverse Opposite:
A C T G G T C A G C A T C G T A T C G A C A G T C A T G G C T A G A T C T G C A
p-value:1e-10
log p-value:-2.337e+01
Information Content per bp:1.660
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif278.7
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets50.6 +/- 27.3bp
Average Position of motif in Background46.9 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGTCATTATC
NTGTCAN----
 A C G T A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGTCATTATC
-GTCATN---
 A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------TGTCATTATC
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGTCATTATC
CCTGTCAA----
 A C G T A C G T A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTCATTATC
YTGWCADY---
 A C G T A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGTCATTATC
--YCATTAMC
 A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTCATTATC--
ATGACATCATCNN
 A C G T A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

MEOX2/MA0706.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGTCATTATC
AGTAATTAAC
 A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTCATTATC
TGTCANYT--
 A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTCATTATC
AGTAATTAAC
 A C G T C T A G C G A T G A T C G T C A A G C T G C A T C G T A C A G T T G A C
T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C