Information for 11-GTGACGGATGAGT (Motif 16)

A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T
Reverse Opposite:
G T C A A G T C A G C T A G T C G T C A A C G T A G T C A G T C A T C G A C G T A G T C C T G A A G T C
p-value:1e-11
log p-value:-2.668e+01
Information Content per bp:1.934
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 16.5bp
Average Position of motif in Background49.9 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX1/MA0779.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTGACGGATGAGT---
CGTCACGCATGACTGCA
 A C G T A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PAX9/MA0781.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTGACGGATGAGT---
CGTCACGCATGACTGCA
 A C G T A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGACGGATGAGT
ATGATKGATGRC-
 A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGACGGATGAGT
ATGACGTA-----
 A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGACGGATGAGT
GTGGGGGAGGGG-
 A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

Pax6/MA0069.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGACGGATGAGT-
TTCACGCATGAGTT
 A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGACGGATGAGT
-TGATTRATGGCY
 A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T
A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GTGACGGATGAGT-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGACGGATGAGT
-TGATTGATGA--
 A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GTGACGGATGAGT----
------GATGAGTCATN
 A C T G A G C T A C T G C G T A A T G C A C T G A C T G C G T A A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G