Information for 7-TGAATCRCCTGSTGTG (Motif 12)

A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A G T A C C T G A T A C G A G T C C G T A C A T G A C T G G A C T C A T G C G T A G C A T A G C T A G T C C G T A
p-value:1e-13
log p-value:-3.041e+01
Information Content per bp:1.768
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.7 +/- 26.7bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TGAATCRCCTGSTGTG---
----TNTCCTGCTGTGNNG
 A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TGAATCRCCTGSTGTG---
----NNTCCTGCTGTGNNN
 A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TGAATCRCCTGSTGTG---
----TCNCCTGCTGNGNNN
 A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGAATCRCCTGSTGTG
----CCCCCTGCTGTG
 A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TGAATCRCCTGSTGTG-
-------CCTGCTGAGH
 A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAATCRCCTGSTGTG-
--GGCCYCCTGCTGDGH
 A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGAATCRCCTGSTGTG
NATGAGTCACC-------
 A C G T A C G T A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGAATCRCCTGSTGTG
--GACCCCCCGCTGTG
 A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G
A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGAATCRCCTGSTGTG--
--------ATGGGGTGAT
 A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TGAATCRCCTGSTGTG--
--------ATGGGGTGAT
 A C G T A C T G C T G A C G T A C G A T G A T C C T A G A G T C G A T C A C G T C T A G A T C G G A C T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T