Information for 6-GCCACAGGGACTGTCA (Motif 9)

C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T C A A G T C C G T A A C T G A G C T A T G C A G T C A G T C A C G T A C T G C G A T C T A G A C T G A G T C
p-value:1e-16
log p-value:-3.772e+01
Information Content per bp:1.829
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 20.5bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCCACAGGGACTGTCA----
----AAGCACCTGTCAATAT
 C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCACAGGGACTGTCA
--CACAGN--------
 C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCACAGGGACTGTCA
AGCCTCAGGCA------
 A C G T C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCACAGGGACTGTCA
NTNGCCTCAGGCNNN----
 A C G T A C G T A C G T C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCCACAGGGACTGTCA----
----CAATCACTGGCAGAAT
 C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:GCCACAGGGACTGTCA-
---------GCTGTCAA
 C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCACAGGGACTGTCA
AAACCACAGAN-------
 A C G T A C G T C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCACAGGGACTGTCA
CGCCTCAGGCA------
 A C G T C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GCCACAGGGACTGTCA--
--------VGCTGWCAVB
 C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCACAGGGACTGTCA
NTCGCCTCAGGCAAT----
 A C G T A C G T A C G T C T A G G T A C A G T C C G T A A G T C C G T A A C T G C T A G A T C G C T G A A G T C C G A T A C T G A C G T A G T C C G T A
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T