Information for 20-AKGGAGGMAGCCATGC (Motif 31)

T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C
Reverse Opposite:
A C T G G T A C G T C A A G C T A T C G A T C G G A T C G A C T A C T G A G T C A G T C A G C T A G T C G T A C G T C A A C G T
p-value:1e-7
log p-value:-1.790e+01
Information Content per bp:1.757
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.8 +/- 18.7bp
Average Position of motif in Background43.1 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------AKGGAGGMAGCCATGC
SMCAGTCWGAKGGAGGAGGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AKGGAGGMAGCCATGC
-GGGAGGACNG-----
 T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AKGGAGGMAGCCATGC
-ARGAGGMCAAAATGW
 T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C
A C G T T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AKGGAGGMAGCCATGC-
--SCAGYCADGCATGAC
 T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AKGGAGGMAGCCATGC
GGAAGGAAGGAAGGAAGG-
 A C G T A C G T A C G T T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G A C G T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--AKGGAGGMAGCCATGC
TAATGGCGGNC-------
 A C G T A C G T T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AKGGAGGMAGCCATGC--
--GCAGCCAAGCGTGACN
 T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C A C G T A C G T
A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:AKGGAGGMAGCCATGC
-NDCAGGAARTNN---
 T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-AKGGAGGMAGCCATGC------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:AKGGAGGMAGCCATGC
--NGAAGC--------
 T G C A A C G T A C T G A C T G C T G A A C T G A C T G G T A C C T G A C A T G A T G C A T G C C T G A A C G T A C T G G T A C
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T