Information for 10-GRTAACCTGKTAR (Motif 21)

A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A
Reverse Opposite:
A G C T A C G T C G T A G T C A A G T C C G T A A C T G T C A G A G C T A C G T C G T A A G T C G T A C
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.783
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets29.8 +/- 18.0bp
Average Position of motif in Background64.7 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GRTAACCTGKTAR
---AAGGTGTKAA
 A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A
A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

TFAP4/MA0691.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GRTAACCTGKTAR
-ATCAGCTGTT--
 A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A
A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GRTAACCTGKTAR------
--NNNNCTGTTAACNNTNN
 A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GRTAACCTGKTAR
GGTCACGTGGC--
 A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GRTAACCTGKTAR-
----AGGTGTTAAT
 A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GRTAACCTGKTAR------
--TAAACTGATAAGAAGAT
 A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GRTAACCTGKTAR
CGACCATCTGTT--
 A C G T A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GRTAACCTGKTAR
GGTCACATGAC--
 A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GRTAACCTGKTAR--
CNGACACCTGTTCNNN
 A C G T A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GRTAACCTGKTAR---
AATTACCTGTCAATAC
 A C T G C T A G C G A T G T C A C T G A A G T C G T A C A C G T A C T G A C G T A C G T C G T A C T G A A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C