Information for 9-CATGTGAAACTTGGCA (Motif 9)

T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A
Reverse Opposite:
G C A T T A C G A G T C G T A C C G T A G T C A A C T G A G C T A C G T A C G T A T G C G T C A A G T C G T C A A C G T A C T G
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.712
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 23.4bp
Average Position of motif in Background30.7 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CATGTGAAACTTGGCA
------AAGCTTG---
 T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CATGTGAAACTTGGCA--
--------NNTTGGCANN
 T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:CATGTGAAACTTGGCA--
---------NTTGGCANN
 T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:CATGTGAAACTTGGCA-
---------CTTGGCAA
 T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.55
Offset:10
Orientation:forward strand
Alignment:CATGTGAAACTTGGCA
----------TTGGCA
 T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Creb3l2/MA0608.1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CATGTGAAACTTGGCA
------ACACGTGGC-
 T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CATGTGAAACTTGGCA
GAAAMTGAAACT-----
 A C G T T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CATGTGAAACTTGGCA-
-----GWAAYHTGABMC
 T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CATGTGAAACTTGGCA-
---NNGTCGCGTGNCAC
 T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A A C G T
A C G T A C G T A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CATGTGAAACTTGGCA
CGGAAGTGAAAC------
 A C G T A C G T T A G C C G T A A C G T C T A G C A G T A T C G C G T A G T C A T C G A A G T C A C G T A C G T C A T G C T A G A T G C C G T A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T