Information for 21-CTGTATTCGA (Motif 47)

A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A
Reverse Opposite:
G A C T A G T C C A T G T C G A T G C A C A G T C T G A T G A C T C G A T A C G
p-value:1e-1
log p-value:-4.166e+00
Information Content per bp:1.744
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets4.0 +/- 0.0bp
Average Position of motif in Background41.4 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGTATTCGA-----
CCGTATTATAAACAA
 A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A A C G T A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTGTATTCGA--
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGTATTCGA
TGTGGATTNNN
 A C G T A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGTATTCGA---
GGACTGAATTCATGCC
 A C G T A C G T A C G T A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGTATTCGA
NNTGTGGATTSS-
 A C G T A C G T A C G T A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGTATTCGA
TTTTTATTGG-
 A C G T A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGTATTCGA
CTGTTTAC--
 A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGTATTCGA
GCTGTG-----
 A C G T A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGTATTCGA---
---TAATCGATAA
 A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

PAX7/MA0680.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTGTATTCGA---
---TAATCGATTA
 A T G C A G C T A C T G G A C T G T C A A C G T A G C T G T A C T C A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A