Information for 22-GKCSCTACAGRRT (Motif 40)

A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T
Reverse Opposite:
T C G A A G T C A G T C G T A C A C G T A T C G A C G T C G T A A C T G A T C G C T A G G T C A A G T C
p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.850
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.4 +/- 27.4bp
Average Position of motif in Background47.1 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBED1/MA0749.1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GKCSCTACAGRRT
TATGTCGCGATAG---
 A C G T A C G T A C G T A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GKCSCTACAGRRT
-----CACAGN--
 A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GKCSCTACAGRRT--
CNNNGCTACTGTANNN
 A C G T A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GKCSCTACAGRRT--
TNNTGCTACTGTNNNN
 A C G T A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GKCSCTACAGRRT
ANTCCCTNGGGAAT
 A C G T A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GKCSCTACAGRRT-----
---GHTACAWTGTADCHR
 A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GKCSCTACAGRRT
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GKCSCTACAGRRT
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GKCSCTACAGRRT
NGTCCCNNGGGA--
 A C G T A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GKCSCTACAGRRT---
-DCHCAGCAGGRGGCC
 A C T G A C G T A G T C A T G C A G T C A C G T C G T A A T G C C G T A A C T G C T A G C T A G A C G T A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C