Information for 13-CGCCCAGCTGGGC (Motif 30)

A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C A C T G
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.943
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 18.2bp
Average Position of motif in Background18.3 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGCCCAGCTGGGC
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CGCCCAGCTGGGC
---HCAGCTGDTN
 A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGCCCAGCTGGGC
CCCCCTGCTGTG-
 A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGCCCAGCTGGGC
-NNVCAGCTGB--
 A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGCCCAGCTGGGC
---CCAGCTGTTN
 A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGCCCAGCTGGGC-
--NVCAGCTGBBNN
 A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGCCCAGCTGGGC
---ACAGCTGTTN
 A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
A C G T A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGCCCAGCTGGGC
GACCCCCCGCTGCGC
 A C G T A C G T A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGCCCAGCTGGGC
-NNACAGCTGC--
 A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCCCAGCTGGGC
GACCCCCCGCTGTG-
 A C G T A C G T A G T C A C T G A G T C G T A C A G T C C G T A A C T G A G T C C G A T A C T G A C T G A C T G A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T