Information for 12-CACRAAACCAAAC (Motif 29)

A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C
Reverse Opposite:
A C T G C G A T A G C T A C G T A C T G A C T G C G A T A C G T A C G T A G C T A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.819
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 21.6bp
Average Position of motif in Background54.7 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACRAAACCAAAC-
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACRAAACCAAAC
CGTATCGAAACCAAA-
 A C G T A C G T A C G T A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T

IRF8/MA0652.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACRAAACCAAAC--
-TCGAAACCGAAACT
 A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C A C G T A C G T
A C G T G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CACRAAACCAAAC
ATAAACCGAAACCAA--
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACRAAACCAAAC--
AACGAAACCGAAACT
 A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACRAAACCAAAC------
--CAAATCCAGACATCACA
 A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACRAAACCAAAC---
-CAAAATCGAAACTAA
 A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C A C G T A C G T A C G T
A C G T T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CACRAAACCAAAC
ACTGAAACCA---
 A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CACRAAACCAAAC-
----AAACCACANN
 A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CACRAAACCAAAC-
----ATGCCAGACN
 A G T C G T C A A G T C C T A G C G T A C G T A G C T A A G T C A G T C G T C A C T G A C G T A G T A C A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C