Information for 9-AAAAAATCAC (Motif 23)

C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C
Reverse Opposite:
A T C G A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T G A C T
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.834
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif181.6
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets54.1 +/- 23.0bp
Average Position of motif in Background50.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AAAAAATCAC--
--CAAATCACTG
 C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AAAAAATCAC
TACTGGAAAAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAAAAATCAC----
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAAAAATCAC----
AAAAAATCAATAAT
 C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAAAAATCAC----
---AAATCACAGCA
 C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAAAAATCAC
GGCCATAAATCAC
 A C G T A C G T A C G T C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAAAAATCAC
-AAAAGTCAA
 C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAATCAC--
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAAAAATCAC--
GCAAAACATTACTA
 A C G T A C G T C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAAAATCAC
GCCATAAATCA-
 A C G T A C G T C T G A G T C A T G C A C G T A G T C A T G C A A C G T G T A C G T C A A T G C
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T