Information for 8-AGTCCTCATTTAA (Motif 22)

C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A
Reverse Opposite:
A C G T A G C T C T G A C T G A C T G A A C G T C T A G C G T A A C T G C T A G C G T A A G T C C G A T
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 24.6bp
Average Position of motif in Background43.5 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTCCTCATTTAA--
TGWCCTCARNTGACC
 C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A A C G T A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGTCCTCATTTAA
CGAACAGTGCTCACTAT-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGTCCTCATTTAA
TGACCTYA-----
 C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AGTCCTCATTTAA
GGCAAAAGTCCAATAA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGTCCTCATTTAA-----
-GACCACATTCATACAAT
 C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGTCCTCATTTAA
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGTCCTCATTTAA
TCCAATCCACA-----
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGTCCTCATTTAA
-----GCACTTAA
 C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A
A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AGTCCTCATTTAA--
------NATTCAAAT
 C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCTCATTTAA
SSAATCCACANN---
 A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G A T A G T C C G T A A G C T A G C T A G C T C T G A C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T