Information for 15-GCCCTTTACAAAGGAG (Motif 16)

A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G A T C A C G T A C G T A C G T C T A G C A G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.4 +/- 14.2bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCCTTTACAAAGGAG-
-AAACAGACAAAGGAAT
 A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCCCTTTACAAAGGAG
------AACAAAGG--
 A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCCCTTTACAAAGGAG
------RACAAWGG--
 A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCCCTTTACAAAGGAG
-------ACAAAG---
 A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCCCTTTACAAAGGAG---
-------ACAAAGGNBCCT
 A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCCCTTTACAAAGGAG
-GNCTATAAAAGG---
 A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCCCTTTACAAAGGAG--
-ATAAGAACAAAGGACTA
 A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G A C G T A C G T
A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCCCTTTACAAAGGAG--
-AGAAGAACAAAGGACTA
 A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTTACAAAGGAG
GTGCCGTGTGCAAA----
 A C G T A C G T A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCCCTTTACAAAGGAG
TGACCTTTNCNT-----
 A C G T A C T G A G T C G T A C A G T C A C G T C G A T A C G T G C T A A G T C C G T A C G T A C G T A C A T G A C T G C G T A A C T G
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T A C G T A C G T