Information for 12-GCAGGSAGMRSCAGTG (Motif 12)

A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C T G A T G C A G T C A C G T A G T C G C A T A T G C A G T C G T A C A C G T A C T G A G T C
p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.815
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.6 +/- 27.9bp
Average Position of motif in Background34.2 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGSAGMRSCAGTG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCAGGSAGMRSCAGTG-----
----NNNANTGCAGTGCNNTT
 A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GCAGGSAGMRSCAGTG
------AGAGGAAGTG
 A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GCAGGSAGMRSCAGTG
CACAGCAGGGGG--------
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GCAGGSAGMRSCAGTG----
----NNNNTGCCAGTGATTG
 A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.47
Offset:-6
Orientation:forward strand
Alignment:------GCAGGSAGMRSCAGTG
TGGCCACCAGGGGGCGCTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.47
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGSAGMRSCAGTG
DCHCAGCAGGRGGCC------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:8
Score:0.46
Offset:6
Orientation:forward strand
Alignment:GCAGGSAGMRSCAGTG
------AGCGGAAGTG
 A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.45
Offset:8
Orientation:forward strand
Alignment:GCAGGSAGMRSCAGTG--
--------AGCCAATCGG
 A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.45
Offset:6
Orientation:reverse strand
Alignment:GCAGGSAGMRSCAGTG------
------TGACCCAGTGACCTAC
 A C T G A G T C C G T A A C T G C T A G A T C G C G T A A C T G G T C A C T A G A T C G A G T C C G T A C T A G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C