Information for 6-AACAGATRGAGCC (Motif 18)

C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
Reverse Opposite:
C T A G C T A G A T G C A G C T A G T C A G C T T C G A A C G T A G T C A C G T A C T G A G C T A C G T
p-value:1e-10
log p-value:-2.475e+01
Information Content per bp:1.760
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.1 +/- 26.1bp
Average Position of motif in Background49.1 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AACAGATRGAGCC
AACAGATGGT---
 C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AACAGATRGAGCC
AACAGATGGC---
 C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACAGATRGAGCC
AACAKATGGY---
 C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACAGATRGAGCC
AACAGATGGTCN-
 C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AACAGATRGAGCC
NHAACBGYYV-----
 A C G T A C G T C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AACAGATRGAGCC
-GRTGMTRGAGCC
 C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AACAGATRGAGCC
-CCAGACRSVB--
 C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AACAGATRGAGCC
NAACAGCTGG----
 A C G T C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AACAGATRGAGCC
-CCAGACAG----
 C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AACAGATRGAGCC
AACCGANA-----
 C G T A C T G A G T A C T C G A A C T G C G T A A G C T T C G A C T A G C T G A T A C G A G T C A G T C
C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T