Information for 13-SCCCKGYTGGAKGSAG (Motif 17)

T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G
Reverse Opposite:
T A G C C G A T A T G C A T G C G T A C C G A T T A G C G T A C C G T A C T A G A T G C G T C A A C T G A C T G A T C G A T C G
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.697
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.4 +/- 20.2bp
Average Position of motif in Background64.3 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:SCCCKGYTGGAKGSAG-----
-GCCASCAGGGGGCGCYVNNG
 T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-SCCCKGYTGGAKGSAG---
TGGCCACCAGGTGGCACTNT
 A C G T T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-SCCCKGYTGGAKGSAG
CCCCCTGCTGTG-----
 A C G T T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:SCCCKGYTGGAKGSAG
DCHCAGCAGGRGGCC-
 T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-SCCCKGYTGGAKGSAG--
TGGCCACCAGGGGGCGCTA
 A C G T T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.47
Offset:1
Orientation:forward strand
Alignment:SCCCKGYTGGAKGSAG-----
-SMCAGTCWGAKGGAGGAGGC
 T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.46
Offset:11
Orientation:reverse strand
Alignment:SCCCKGYTGGAKGSAG-
-----------NGAAGC
 T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.46
Offset:11
Orientation:reverse strand
Alignment:SCCCKGYTGGAKGSAG-----
-----------GGGAGGACNG
 T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.46
Offset:7
Orientation:forward strand
Alignment:SCCCKGYTGGAKGSAG--
-------GGGCGGGAAGG
 T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-SCCCKGYTGGAKGSAG
CCACCTGTTGCAT----
 A C G T T A G C A T G C G T A C T G A C C A G T A T C G A G T C G C A T A C T G A T C G G C T A A C T G A T C G A T C G C G T A A T C G
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T A C G T