Information for 12-GTGACAWAGT (Motif 37)

C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T
Reverse Opposite:
C T G A A G T C C G A T C G T A G C A T T C A G G A C T A G T C C G T A A G T C
p-value:1e-7
log p-value:-1.650e+01
Information Content per bp:1.764
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif138.0
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets49.1 +/- 26.7bp
Average Position of motif in Background51.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTGACAWAGT
NCGTGACN----
 A C G T A C G T C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTGACAWAGT
ATGACGTA--
 C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGACAWAGT-
-TGACCTARTT
 C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGACAWAGT
TTGACAG---
 C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTGACAWAGT-
CAGCATGACTCAGCA
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T A C G T
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

MAF::NFE2/MA0501.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGACAWAGT-----
ATGACTCAGCAATTT
 C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T A C G T A C G T A C G T A C G T A C G T
T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A C A T G A T G C C T G A C T G A C G A T G C A T G A C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGACAWAGT
ARNTGACA----
 A C G T A C G T C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GTGACAWAGT
RTCATGTGAC-----
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGACAWAGT
AGGTGTGAAM--
 A C G T A C G T C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGACAWAGT----
TTGACCTANTTATN
 C T A G A C G T A C T G C G T A A G T C C G T A C G A T C G T A A C T G G A C T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A