Information for 16-GAATTTGTTGGCT (Motif 29)

A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G T A C G T A A G T C C G T A C T G A G T C A A G C T A C G T A G T C
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 21.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GAATTTGTTGGCT
-------TTGGCA
 A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GAATTTGTTGGCT--
------NTTGGCANN
 A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAATTTGTTGGCT--
NGANTTTTATGGCTCN
 A C G T A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAATTTGTTGGCT-
TAAAAATGCTGACTT
 A C G T A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAATTTGTTGGCT
---ATTGTT----
 A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GAATTTGTTGGCT--
-----TRTTTACTTW
 A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAATTTGTTGGCT--
NNNNTTTGTTTACNNT
 A C G T A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAATTTGTTGGCT----
AAATTTGCTGACTTAGA
 A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAATTTGTTGGCT--
---TTTGTTTACTTA
 A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAATTTGTTGGCT---
----TGATTGGCTANN
 A C T G C G T A C T G A A C G T A G C T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T