Information for 6-AGGTCAGAAATTTGCA (Motif 9)

C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A C G T A T G C A A G C T A C G T A C G T A G T C C G A T A C T G G C T A G T A C A G T C A C G T
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.750
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 27.4bp
Average Position of motif in Background60.3 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGTCAGAAATTTGCA
TRAGGTCA----------
 A C G T A C G T C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGTCAGAAATTTGCA
AGGTCA----------
 C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGTCAGAAATTTGCA
CAAAGGTCAG---------
 A C G T A C G T A C G T C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGAAATTTGCA
AAGGTCAC---------
 A C G T C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGGTCAGAAATTTGCA
ATCAAGGTCA----------
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCAGAAATTTGCA
TCAAGGTCAN---------
 A C G T A C G T A C G T C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGTCAGAAATTTGCA
AGRGGTCA----------
 A C G T A C G T C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGGTCAGAAATTTGCA
CAAAGGTCAAGGG------
 A C G T A C G T A C G T C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGGTCAGAAATTTGCA---
----GAAAAAATTGCAAGG
 C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGGTCAGAAATTTGCA
TCAAGGTCAT---------
 A C G T A C G T A C G T C G T A A C T G A C T G C G A T G T A C C G T A C T A G G T C A T C G A C T G A A C G T C G A T C G A T C T A G G T A C C G T A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T