Information for 6-CTCTAGAGGG (Motif 8)

A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G
Reverse Opposite:
T A G C G A T C G A T C G A C T A T G C G A C T C T G A C T A G C T G A T C A G
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.460
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif4.13%
Number of Background Sequences with motif358.4
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets40.9 +/- 24.3bp
Average Position of motif in Background49.4 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTCTAGAGGG--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCTAGAGGG-----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTCTAGAGGG------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGAGGG-
TCCCNNGGGACN
 A C G T A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCTAGAGGG
GNCTATAAAAGG
 A C G T A C G T A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGAGGG
TGTCTAGACG-
 A C G T A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTCTAGAGGG---
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTAGAGGG
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCTAGAGGG
BTBRAGTGSN
 A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCTAGAGGG
CTYRAGTGSY
 A G T C G A C T A G T C G A C T C T G A T A C G C T G A C T A G C T A G A T C G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C