Information for 5-GCWGACAGGATGAATT (Motif 6)

A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T
Reverse Opposite:
C T G A C G T A A C G T C G A T A G T C C G T A A C G T G T A C A G T C A G C T A C T G A C G T A G T C G C A T T C A G A T G C
p-value:1e-12
log p-value:-2.854e+01
Information Content per bp:1.776
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.7 +/- 21.2bp
Average Position of motif in Background16.4 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0138.1_Pitx2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCWGACAGGATGAATT---
--TGAAGGGATTAATCATC
 A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCWGACAGGATGAATT---
--TAGAGGGATTAAATTTC
 A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T A C G T A C G T A C G T
A C G T A C G T G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCWGACAGGATGAATT---
--NANAGGGATTAATTATN
 A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCWGACAGGATGAATT---
--AGAGGGGATTAATTTAT
 A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T A C G T A C G T A C G T
A C G T A C G T C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCWGACAGGATGAATT---
--TGTAGGGATTAATTGTC
 A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T A C G T A C G T A C G T
A C G T A C G T C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCWGACAGGATGAATT
---AACAGGAAGT---
 A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCWGACAGGATGAATT-
-CTACTAGGATGTNNTN
 A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T A C G T
A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCWGACAGGATGAATT
GGTGYTGACAGS-------
 A C G T A C G T A C G T A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCWGACAGGATGAATT
---NDCAGGAARTNN-
 A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T
A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCWGACAGGATGAATT--
-TGAACCGGATTAATGAA
 A T C G A G T C C G T A A C T G G T C A G T A C C T G A A C T G A C T G C G T A C G A T C T A G C G T A C G T A G C A T A G C T A C G T A C G T
A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A