Information for 3-GCCAYCTRGTGGMCAT (Motif 3)

C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
Reverse Opposite:
G C T A G A C T A C T G C A G T G A T C A G T C C G T A T A G C G A T C C G T A A C T G C T G A C A G T A C T G C T A G G A T C
p-value:1e-15
log p-value:-3.571e+01
Information Content per bp:1.623
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif86.3
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets51.9 +/- 20.0bp
Average Position of motif in Background51.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----GCCAYCTRGTGGMCAT
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----GCCAYCTRGTGGMCAT
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.77
Offset:-7
Orientation:forward strand
Alignment:-------GCCAYCTRGTGGMCAT
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:GCCAYCTRGTGGMCAT
--------GTGGAT--
 C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCCAYCTRGTGGMCAT
---AACAGGTGNT---
 C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCCAYCTRGTGGMCAT---
--NNANTGGTGGTCTTNNN
 C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T A C G T A C G T A C G T
A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

SCRT1/MA0743.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCAYCTRGTGGMCAT
GAGCAACAGGTGGTT--
 A C G T C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCAYCTRGTGGMCAT
---NNCAGGTGNN---
 C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCCAYCTRGTGGMCAT
-----CACGTGGC---
 C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCAYCTRGTGGMCAT
---ACCACGTG-----
 C T A G G A T C G T A C G T C A G A C T T A G C C G A T C T A G A C T G C G A T A C T G C A T G G T C A G T A C C T G A C G A T
A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T A C G T A C G T A C G T