Information for 4-MAGCTGCAGMCAGGAG (Motif 6)

T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C A G T C A G C T A C T G A C G T A G T C A C G T A C T G A T G C G C T A A T C G A T G C A G C T A C G T
p-value:1e-12
log p-value:-2.839e+01
Information Content per bp:1.728
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif27.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.2 +/- 25.0bp
Average Position of motif in Background50.5 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--MAGCTGCAGMCAGGAG
GACAGCTGCAG-------
 A C G T A C G T T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--MAGCTGCAGMCAGGAG
AACAGCTGCAG-------
 A C G T A C G T T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-MAGCTGCAGMCAGGAG
NCAGCTGCTG-------
 A C G T T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--MAGCTGCAGMCAGGAG
AGCAGCTGCTNN------
 A C G T A C G T T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---MAGCTGCAGMCAGGAG
NNACAGCTGC---------
 A C G T A C G T A C G T T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------MAGCTGCAGMCAGGAG
NNNNAGCAGCTGCTGAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----MAGCTGCAGMCAGGAG
NGNGACAGCTGCN--------
 A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:MAGCTGCAGMCAGGAG
-----CCAGACAG---
 T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:MAGCTGCAGMCAGGAG
CAGCTGNT--------
 T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--MAGCTGCAGMCAGGAG
AGCAGCTGCT--------
 A C G T A C G T T G C A C T G A A T C G A T G C C G A T A T C G G T A C G T C A A C T G G T C A T A G C C T G A C T A G T C A G C T G A A C T G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T