Information for 10-CTBGTGTCCTGAG (Motif 4)

A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C C G T A A C T G A T C G C G T A A G T C C T G A A G T C T C A G C T G A A C T G
p-value:1e-17
log p-value:-4.086e+01
Information Content per bp:1.827
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 27.5bp
Average Position of motif in Background43.4 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTBGTGTCCTGAG
----TGACCTYA-
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTBGTGTCCTGAG--
---ATGCCCTGAGGC
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTBGTGTCCTGAG
---GTGACCTT--
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTBGTGTCCTGAG
CNNTTGACCTTTG
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTBGTGTCCTGAG--
---WTGSCCTSAGGS
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTBGTGTCCTGAG------
----TGWCCTCARNTGACC
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTBGTGTCCTGAG----
---NTGCCCANNGGTNA
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTBGTGTCCTGAG
----TGACCT---
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTBGTGTCCTGAG
---CTGACCTTTG
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTBGTGTCCTGAG--
---GTGGCGTGACNG
 A G T C G A C T A G C T C T A G A G C T A C T G C G A T A T G C A G T C A C G T A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G