Information for 16-CCTAGCGGYCMCT (Motif 17)

A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T
Reverse Opposite:
G T C A A T C G A C G T A C T G C T G A A G T C A G T C A C T G A G T C A C G T C G T A A C T G A C T G
p-value:1e-6
log p-value:-1.569e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.9 +/- 25.9bp
Average Position of motif in Background24.5 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTAGCGGYCMCT---
GGCGAGGGGTCAAGGGC
 A C G T A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGCGGYCMCT---
NNNCAGCTGTCAATATN
 A C G T A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCTAGCGGYCMCT
---AGRGGTCA--
 A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------CCTAGCGGYCMCT
TAGCGCCCCCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCTAGCGGYCMCT
--YAACBGCC---
 A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T
A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTAGCGGYCMCT
-CCAACTGCCA--
 A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCTAGCGGYCMCT-
--NCGCGGACGTTG
 A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T A C G T
A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------CCTAGCGGYCMCT
TTTCGAGCGGAACGGTCGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCTAGCGGYCMCT--
AACTAGCTGTCAATAC
 A C G T A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:-9
Orientation:forward strand
Alignment:---------CCTAGCGGYCMCT
ANAGTGCCACCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T G T C A A C T G A G T C A C T G A C T G A G C T A G T C G T C A A T G C C A G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T