Information for 15-TGTCCCTGAGCTC (Motif 16)

A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C
Reverse Opposite:
A C T G C T G A A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A G T C C G T A
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 28.1bp
Average Position of motif in Background40.0 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTCCCTGAGCTC
TGACCTTGACCT-
 A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTCCCTGAGCTC
TGACCTTGACCT-
 A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCCTGAGCTC
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTCCCTGAGCTC
TGACCTTGAN---
 A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTCCCTGAGCTC
AGGTCANTGACCTN
 A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGTCCCTGAGCTC-
------TGACCYCT
 A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTCCCTGAGCTC
TGACCTTGAV---
 A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCCTGAGCTC
CTGTTCCTGG----
 A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCCTGAGCTC
BNTGDCCTTG-----
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TGTCCCTGAGCTC-
------TGACCTYA
 A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A