Information for 7-CGCGGCBCTAACGGGH (Motif 12)

G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C
Reverse Opposite:
C T A G A T G C A T G C A G T C A C T G A G C T A C G T C T G A C T A G T A C G A C T G A T G C A G T C C A T G A T G C A C T G
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.751
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.5 +/- 27.8bp
Average Position of motif in Background62.4 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGCGGCBCTAACGGGH
-GGGGCCCAAGGGGG-
 G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C
A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCGGCBCTAACGGGH
CCTTCGGCGCCAAAAGG-
 A C G T A C G T G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGCGGCBCTAACGGGH-------
---GCCASCAGGGGGCGCYVNNG
 G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGCGGCBCTAACGGGH
---TGCCCTNAGGGCA
 G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCGGCBCTAACGGGH
AGCGCGCC----------
 A C G T A C G T G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCGGCBCTAACGGGH
AGCTCGGCGCCAAAAGC-
 A C G T A C G T G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGCGGCBCTAACGGGH
---GNCTATAAAAGG-
 G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C
A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CGCGGCBCTAACGGGH
GCCCCGCCCCCTCCC---
 A C G T A C G T G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGCBCTAACGGGH--
TAGCGCCCCCTGGTGGCCA
 A C G T G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CGCGGCBCTAACGGGH
---TGCCCNNAGGGCA
 G T A C A T C G G T A C A C T G A T C G A G T C A T G C A G T C A G C T T G C A C T G A G T A C A C T G A T C G A T C G G A T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A