Information for 24-TTAAGATGGTGTA (Motif 29)

A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T A C G T C G T A C G T A
p-value:1e-6
log p-value:-1.431e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 21.4bp
Average Position of motif in Background21.1 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTAAGATGGTGTA
-CAAGATGGCGGC
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTAAGATGGTGTA------
--AAGACGCTGTAAAGCGA
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTAAGATGGTGTA------
--AAGACGCTGTAAAGCGA
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTAAGATGGTGTA
-CAAGATGGCGGC
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTAAGATGGTGTA------
--AGGACGCTGTAAAGGGA
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

JUN/MA0488.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTAAGATGGTGTA--
--AAGATGATGTCAT
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A C G T
A C G T A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGATGGTGTA
NTAATTAATAT------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TTAAGATGGTGTA--
-----ATGATGCAAT
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TTAAGATGGTGTA
AACAGATGGT---
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TTAAGATGGTGTA---
-AAAGATGATGTCATC
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T
A C G T C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C